Synthetic Biology Open Language Visual Graphical notation for - PowerPoint PPT Presentation

May 05, 2023 •160 likes •379 views

Synthetic Biology Open Language Visual Graphical notation for forward engineering of biology Jackie Quinn COMBINE - August 19, 2014 SBOL and SBOL Visual (the basics) visual representation of genetic design Symbol Design (what we focus on)

Synthetic Biology Open Language Visual Graphical notation for forward engineering of biology Jackie Quinn COMBINE - August 19, 2014
SBOL and SBOL Visual (the basics)
visual representation of genetic design
Symbol Design (what we focus on) • Compatibility with current practice • Flexibility • Ease of use
symbol set
relationship to SBOL
use in various contexts
Temme, Zhao, Voigt, PNAS 2012
UC Berkeley iGEM 2012
University of Washington
software
DeviceEditor j5.jbei.org GenoCAD genocad.org
SBOL Designer http://clarkparsia.github.io/sbol/
JBEI-ICE, Pigeon public-registry.jbei.org, pigeoncad.org
BioCompiler synbiotools.bbn.com
Raven ravencad.org
VectorNTI Express Designer
SBOL Visual 2.0? +
SBOL Visual Working Group Aaron Adler Chris Myers Jacob Beal Umesh P Swapnil Bhatia Matthew Pocock Patrick Cai Jackie Quinn Joanna Chen Cesar Rodriguez Kevin Clancy Herbert Sauro Robert Sidney Cox III Larisa Soldatova Michal Galdzicki Guy-Bart Stan Nathan Hillson Grimaldo Urena Cory Li Alan Villalobos Mandy Wilson
Thank You! www.sbolstandard.org/visual visual@sbolstandard.org

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