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Hygiene considerations for source-separated urine collection, storage and processing into a marketable fertilizer Heather N. Bischel Postdoctoral Research Scientist Laboratory of Environmental Chemistry Swiss Federal Institute of Technology,


  1. Hygiene considerations for source-separated urine collection, storage and processing into a marketable fertilizer Heather N. Bischel Postdoctoral Research Scientist Laboratory of Environmental Chemistry Swiss Federal Institute of Technology, Lausanne (EPFL) Simon Schindelholz, Manfred Schoger, Tamar Kohn September 15, 2016

  2. Urine separation & Struvite production Kwazulu- Natal province Population: 3.5M >80K Urine-Diverting Dry Toilets Durban (UDDTs) in rural/peri-urban areas Struvite production: Add Mg 2+ , gentle mix, Valorisation of Cotton bag Filters Urine Nutrients in Africa MgNH 4 PO 4 ·6H 2 O (VUNA) Drying outdoors under cover 2

  3. Hygiene Considerations 1g of fresh feces from an infected person can contain: ~10 6 viral pathogens 10 6 -10 8 bacterial pathogens 10 4 protozoan cysts or oocysts 10 – 10 4 helminth eggs Feachem et al, 1983 Source-separated urine is not sterile! Human pathogens detected in source-separated urine in Durban Diarrheal Human Bacteria viruses E.g.,: E.g.,: Shigella spp. , Rotavirus, Vibrio spp., Adenovirus, E. coli 0157:H7 Hepatitis A Virus Bischel et al, Wat. Res. 2015 3

  4. Overall Objectives Characterize and optimize hygiene of urine storage and recycling Pathogens: Fertilizer Urine Struvite Production Excretion in application Storage & Drying feces / urine 1. Which hazards 2. How can we mitigate them? 3. Health risk are there? Inactivation Kinetics and Mechanisms implications? Challenges • Anticipate short-term urine storage for process scale-up or in dense locations • Which microbial targets to evaluate? Pathogen indicators and in situ bacteria • Manual struvite production in the field: Variable temperature and humidity 4

  5. Inactivation Potential During Urine Storage BACTERIA: VIRUSES: e.g., E. coli and Salmonella e.g., C. perfringens spores: e.g., Rotavirus Slower inactivation Rapid die-off T 90 ~ 35 d Little to no reduction T 90 < 5 d at ~20 ° C at 20 ° C, 1:2 dilution ( Höglund , Stenström et al. 1998; Vinneras et al. 2008; Schonning 2001; Höglund, Ashbolt et al. 2002. Decrey et al. 2015, 2016) and others Inactivation depends on: • Organism (e.g., gram negative/positive bacterium; viral genome type) • Urine storage temperature • Ammonia concentration (urine dilution and storage conditions) • pH (ammonia speciation) Viable bacteria present after long-term storage And even urine treatment (Lahr et al, 2016) Inactivation during fertilizer production important after short-term urine storage

  6. Inactivation during Struvite Precipitation & Drying Laboratory-made Struvite Cake • • Evaluate: Inactivation of virus and helminths during • Retention of bacteria in controlled struvite drying struvite cake ↑ inactivation with ↓ moisture content • Bacteria inactivation in ↑ inactivation with ↑ temperature lab (controlled) and field (Decrey et al . Wat. Res. 2011) • Degradation of struvite with T > 55 ˚ C • How to increase inactivation without heat treatment? 6

  7. Methods: Bacteria Inactivation during Struvite Precipitation & Drying Targeted health-relevant bacteria: Heterotrophic plate counts: Salmonella typhimurium Enterococcus spp. Total viable bacteria by flow cytometry: Struvite 1000 1000 (Dead) 100 100 (Live) FL3 (Red) FL3 (Red) 10 10 ~10 10 viable bacteria 1 1 per gram of struvite! 0.1 0.1 0.1 0.1 1 1 10 10 100 100 1000 1000 7 FL1 (Green) FL1 (Green) 1600 1600

  8. In situ measurements by Flow Cytometry 35˚C/40 % RH 0,5 12 Total Live Cells: Log C 0 Dead 11 (Counts/g ww) -0,5 Log C/C 0 10 -1 9 R² = 0,9186 -1,5 Live 8 -2 7 -2,5 3 4 5 6 7 -3 Heterotrophs: Log C 0 20 40 60 (CFU/g ww) Time (hrs) (Dead) (Live) FL3 (Red) FL3 (Red) FL3 (Red) 0 hrs 24 hrs 48 hrs FL1 (Green) FL1 (Green) FL1 (Green) 8

  9. S. typhimurium Isothermal Struvite Drying High Relative Humidity Low Relative Humidity 1 1 0 0 -1 -1 High Humidity Low Humidity Log C/C 0 Log C/C 0 p > 1 -2 p < 1 -2 (Shoulder) (Tailing) -3 -3 -4 -4 -5 -5 0 200 400 600 0 200 400 600 Time (hrs) Time (hrs) Weibull Model: Distribution of resistances to inactivation • Tailing can result from, e.g.: log10(C) = log10(𝐷 0 ) − (𝑢 • Reduced probability of lethal hit δ) 𝑞 • Evaporative cooling at low humidity • Shape param. (p) captures tail or shoulder • Dehydration tolerant subpopulation • δ is the time for first-decimal reduction Retention of moisture for continued inactivation (followed by desiccation) 9

  10. In situ Heterotrophic Bacteria Inactivation Controlled Lab Conditions Field Conditions 2 2 eThekwini Batch Nylon Filters Swiss Batch 1 Cotton Filters 1 1 0 0 Log(C/C 0 ) Log(C/C 0 ) -1 -1 -2 -2 -3 -3 -4 -4 -4 -3 -2 -1 0 -4 -3 -2 -1 0 Relative Moisture Content, Log( θ / θ 0 ) Log( θ / θ 0 ) Dynamic Field conditions: Oscillating temperature and relative humidity 10

  11. Recommendations for inactivation of pathogens during struvite production Wet-heating for enhanced Soil Solarization inactivation of bacteria Addabbo et al 2010 Inactivation dependent on relative humidity Minimum temperature (35 ˚ C) required for helminth inactivation struvite degrades T > 55 ˚ C Desiccation: reduce moisture content for virus, helminth, & http://www.ipm.ucdavis.edu/ bacteria inactivation 11

  12. Summary & Next steps Characterize and optimize hygiene of urine storage and recycling Pathogens: Fertilizer Urine Struvite Production Excretion in application Storage & Drying feces / urine 1. Which hazards are there? 2. How can we mitigate them? Source-separated urine is not sterile! Struvite Production • Contains fecal pathogens – • Bacteria retained in filtered struvite including persistent viruses • Field inactivation consistent with lab • Recommend: Personal protective • Recommend: initial retention of moisture equipment; sealed storage followed by desiccation Quantitative microbial risks assessment: during urine collection, handling and struvite production 12

  13. Acknowledgements Funding: US and Swiss NSF • Tamar Kohn, Laboratory of Environmental Chemistry Bill & Melinda Gates • Kai Udert & Bastian Etter, Eawag/VUNA Foundation • Teddy Gounden, EWS Field staff Rotary Foundation • Chris Buckley, Sara Rhoton, Nicola Rodda, UKZN EPFL, EWS and Eawag • Simon Schindelholz, Manfred Schoger, Loic Decrey Contact Info After April 2017: Heather Bischel, Asst Prof University of California, Davis hbischel@ucdavis.edu

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