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I considered this Title: But then decided on just: #1 DOMESTICATION Fiv ive In Innovatio ions that has changed Shrim imp cult lture SPF/Nucleus Breeding; Selective genetics, Auto feeders, Toilet, SPR (SPT) Shrimp Domestication: How


  1. I considered this Title: But then decided on just: #1 DOMESTICATION Fiv ive In Innovatio ions that has changed Shrim imp cult lture SPF/Nucleus Breeding; Selective genetics, Auto feeders, Toilet, SPR (SPT)

  2. Shrimp Domestication: How it revolutionized the worlds shrimp culture industry Robins McIntosh Charoen Pokphand Foods, Public Company Bangkok Thailand

  3. KGS/HECTARE 12000 15000 18000 21000 My V 3000 6000 9000 0 Feb-98 May Voyage to Happiness Sept Dec Belize Mar Jun Sept Dec Mar Jun Sept Dec Mar-01 1998 1995 2001

  4. And Then Thailand 2002 Return to “unhappiness” Low Growth, High size variation Declining Harvest Sizes

  5. 1999: Th The year where domestication in Shrimp became a dominant th theme in

  6. Asian Shrimp Production 4 4 eras an and 2 2 cris crisis is FAO data

  7. SP SPF vannamei Dominate Asia/ Pond reared APE dominate America

  8. What Type of f Program? SPF APE

  9. Important Concepts Which are often mis-understood Defi finition of SPF/SPR/SPT • Specific Pathogen Free Shrimp refers to the health status of a stock and not a genetic characteristic. To be SPF a shrimp should be free of all known shrimp virus (not only OIE listed pathogens). • Specific Pathogen Resistant Shrimp refers to a Genetic characteristic- being resistant to infection of a specific pathogen; a shrimp may be SPF and SPR. • Specific Pathogen Tolerant Shrimp refers to a genetic characteristic where the shrimp can get infected but does not express the disease

  10. Developing a Breeding Strategy: • Program II • Program I 0.5 0.5 0.45 0.45 Program A Program B Inbreeding Coefficient 0.4 0.4 0.35 0.35 0.3 0.3 0.25 0.25 0.2 0.2 0.15 0.15 0.1 0.1 0.05 0.05 0 0 1 2 3 4 5 6 7 8 9 10 11 12 13 1 2 3 4 5 6 7 8 9 10 11 12 Generations

  11. Response to introduction of Healthy SPF Domesticated Stocks PRE- DOMESTICATION POST -DOMESTICATION

  12. Response to in introduction of f Healthy SP SPF Domesticated Stocks rms Reduction of f WSSV in in Thai Farm 30 % Crop Loss to WSSV 25 Introduction of Virus Free stocks 20 Interaction with APHNS 15 10 5 0 2001 2002 2003 2004 2005 2006 2007 2008 2009 2010 2016

  13. Nucleus Breeding is is th the defi finition of f SPF Reservoir Reservoir Water recycle unit Plankton Water recycle unit Indoor reservoir Holding unit rearing unit Larval Maturatio n unit Indoor house House House reservoir Broodstock culture Unit Packing office office Lab. Reserv Reserv oir oir Reservoir Reservoir Indoor Reservoir reservoir Reservoir Reservoir Entrance Reservoir Natural canal KaoKaew Necleius Breeding Center

  14. Li Limitation of f PCR sc screening : : no su substitute for nucleus Breeding

  15. Ori rigins of f Founders for SPF Programs; • Process: 1) Screening (pcr + histology) 2) Quarantine- one generation 3) Screening (pcr+ histology) • Hawaiian SPF (original concept): from the ocean • Reverse SPF (newer concept): from infected tolerant pond populations

  16. Reverse SPF performance Data and Work by Dr. Victoria Alday Pesca Nova Group; Ecuador/Nicaragua

  17. Does SPF require an Is Isla land? 2002 CPF executives searching islands for nucleus breeding NO, But it does require nucleus breeding; Most Bio-secure by definition

  18. Broodstock Multiplication 2. SP 2. SPF Blac lack Production of of Com ommercia ial Broodstock

  19. Completely Closed System

  20. Completely Closed Maturation Recycle Broodstock tan anks

  21. Maturation : Maturation Diet Broodstock Feed Semi Moist Feed No live or Fresh Feed: Biosecure

  22. Larval Rearing : Phytoplankton

  23. Larval Rearing : Nursery ; Individual Tank

  24. Secure Multiplication of Broodstock Grow out

  25. Continuous Surveillance Real Time PCR- highest Sensitivity

  26. What defi fines a genetics program

  27. Breeding Strategy: Line Breeding, Cross Breeding, or Breeding to maximize diversity • Program I • Program II Nucleus A Nucleus B 0.5 0.5 0.45 0.45 0.4 0.4 0.35 0.35 0.3 0.3 0.25 0.25 0.2 0.2 0.15 0.15 0.1 0.1 0.05 0.05 0 0 1 2 3 4 5 6 7 8 9 10 11 12 1 2 3 4 5 6 7 8 9 10 11 12 13 Generations CP Breeds to Maximize Diversity- requires much larger populations Other programs use Line Breeding

  28. CPF has changed shrimp farming wit ith fast growing shrimp Days to reach 30 grams from pl 10 Size of top 5% at mean 30 grams

  29. isease Resistance : TSV Dis 29

  30. Maturation without Ablation 90 gram female 30-35 million nauplii/day/1000 females Use females 6 months

  31. Sh Shrim imp Genetic Programs has all llowed for r a genetic so solu lution to dis isease Survival % challenge Generation Development of APHNS (EMS tolerance) in shrimp Stocks

  32. , 28 and 30 gram Age at MBW 24, , 26, = 24 g Target = = 26 g Target = = 28 g Target = = 30 g Target = 32

  33. Statistical Analysis showing traits are not negatively correlated

  34. Genetic reduces costs and enhances value through growth 2012 2016 MBW: 14.5 GMS MBW: 24.1 GMS YIELD: 10.4 MTONS/HA YIELD: 21,300 KGS/HA ADG: 0.18 GMS/DAY ADG: 0.31 GMS/DAY

  35. Functional Genetics Programs cost a lo lot of f Money; b but very ry cost effective 2010 2014 2016 % Culture Pond 77 77 38 DOC 87 59 81 Stock Density /m2 110 79 135 Failure Rate % 0.00 58 0.00 Survival 91 30.5 89 ADG gm/day 0.175 0.28 0.30 MBW 15.5 16.5 25.0 Yield (kg/ha/day) 190 156 333 Pl Efficiency tons/mill 13.6 5 21 Total tons 940 108 728 Cost USD/kg (direct) 2.80 13.90 3.25 Farm Profit mill. USD 1.6 -0.80 2.1

  36. In the future (present) genomics and transcriptomics will reduce the time to respond to new challenges CARMEN First assembled P. vannamei shrimp genome

  37. Without Healthy Post Larvae: Genetics don’t mean very much APHNS Toxin: Atrophy EHP Necrosis Healthy

  38. Domesticating Monodon has presented uniq ique challenges!!!!

  39. Eventually after 7 generations domestication was achieved- “Ease and Predictability of Culture”

  40. Before and Aft fter Domestication of f SPF monodon Before: 2001 After: 2011

  41. Domestication is is V Very ry Dif iffi ficult wit ith Monodon F2 F11 In first 5 Generations lost many families; lost many individuals

  42. TODAY

  43. WSSV- APHNS In Interaction 29.5C 7 day challenge

  44. This is is is not the Future! This is the Now 6 count P. vannamei 160 gram female 5 tons/hectare in one hectare 160 days post nurse Jahore, Malaysia February 2016

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