Jonathan FLYE SAINTE MARIE Born the 8 june 1980 in Bédarieux (France) LEMAR – IUEM Phone : +33(0)2 98 49 88 99 Place Nicolas Copernic Email : jonathan.flye@univ-brest.fr 29280 PLOUZANE FRANCE Education – September 2004 - december 2007 : PhD in Marine Biology at Université de Bretagne Occidentale, Brest, France and Vrije Universiteit, Amsterdam, The Netherlands. Title : Ecophysiology of Brown Ring Disease in the Manila clam Ruditapes philippinarum , experimental and modelling approaches. Supervisors : Fredéric JEAN (Université de Bretagne Occidentale), Sebastiaan A.L.M. KOOIJMAN (Vrije Universiteit) and Christine PAILLARD (CNRS). Laboratories : Laboratoire de sciences de l’environnement marin (LEMAR CNRS UMR 6539), European Institute for Marine Studies (IUEM), Brest, France. Departement of theoretical biology, Vrije Universiteit, Amsterdam, The Netherlands. – February - April 2005 : Third international tele-course on Dynamic Energy Budjet theory , Vrije Uni- versiteit, Amsterdam. http ://www.bio.vu.nl/thb/deb/course/deb/. – September 2004 : Scientific diving (CAH classe 1 mention B) and CNRS diving manager training course, Roscoff. – 2001-2002 : Diplôme d’Etude Approfondies (Master equivalent) in Biological Oceanography and Ma- rine Environment . Speciality : data analysis and marine trophic webs modelling. European Institute for Marine Studies (IUEM), Université de Bretagne Occidentale, Brest, France. – 2000-2001 : Maîtrise (first year of Master equivalent) in Marine Populations and Ecosystems Biology . European Institute for Marine Studies (IUEM), Université de Bretagne Occidentale, Brest, France. (Rank : 2th/68) . – 1999-2000 : 3rd Year University Degree in Organisms Biology . Université Paul Sabatier-Toulouse III, Toulouse, France. (Rank : 3th/158). – 1997-1999 : General Universitary Dilopma in Life Sciences . Université Paul Sabatier-Toulouse III, Tou- louse, France. Marine biology and ecology background – March - August 2004 Employment in LEMAR CNRS UMR 6539 (IUEM, Brest, France). Implementation of a field survey of immunity, pathologies and physiology of a Manila clam population of Gulf of Morbihan (France). – October-december 2003 : Employment in LEMAR CNRS UMR 6539 (IUEM, Brest, France). Crepidula fornicata and Pecten maximum biological samples preparation and packaging for isotopic analysis (carbon, nitrogen). – Septembre 2003 : Employment in LEMAR CNRS UMR 6539 (IUEM, Brest, France). Marine aggregate weel development. – February-June 2003 : Employment in ECOMAR (University de la Réunion, Saint Denis, Indian Ocean, France) Water samples analysis (total alcalinity, nitrate, phosphorus, silicate) and sediment samples analysis (CHN, cholorphyll and pheopigments). Data analysis. 1
– December 2002 : Employment in LEMAR CNRS UMR 6539 (IUEM, Brest, France). Seawater samples filtration, preparation and packaging for CHN analysis. Data analysis. – February-June 2002 : Master training research project (6 months) in LEMAR CNRS UMR 6539 (IUEM, Brest, France). Development of an ecophysiological model of individual growth of the manila clam, Rudi- tapes philippinarum . Supervisor : Frédéric JEAN. – February 2001 : First year of master training research project (1 month) in LEMAR CNRS UMR 6539 (IUEM, Brest, France). Shape variation in the dog whelk, Nucella lapillus , small spatial scale variations. Supervisor : Frédéric JEAN. – October 2000 : Participation to CERPIRAD scientific cruise in Bay of Brest. Crepidula fornicata beds cartography in the Bay of Brest. Publications and Communications Publications Flye-Sainte-Marie, J. , Jean, F., Paillard, C., Ford, S., Powell, E., Hofmann, E., Klinck, J., 2007. Ecophysiological dynamic model of individual growth of Ruditapes philippinarum . Aquaculture 266, 130–143. Flye-Sainte-Marie, J. , Pouvreau, S., Paillard, C., Jean, F., 2007. Impact of Brown Ring Disease on the energy budget of the Manila clam Ruditapes philippinarum . Journal of Experimental Marine Biology and Ecology 349 (2), 378–389. Ni’Longphuirt, S., Clavier, J., and Grall, J., Chauvaud, L. Le Loc’h, F., and Le Berre, I., Flye-Sainte-Marie, J. , and Richard, J., Leynaert, A., 2007. Primary production and spatial distribution of subtidal microphytoben- thos in a temperate coastal system, the Bay of Brest, France. Estuarine, Coastal and Shelf Science . 74 (3), 367–380. Flye-Sainte-Marie, J. , Jean, F., Ford, S. E., Paillard, C., Accepted (in révision). Effect of sediment grain–size on development of brown ring disease in the Manila clam Ruditapes philippinarum . Aquaculture Flye Sainte Marie, J., Soudant, P., Lambert, C., Le Goïc, N., Gonçalvez, M. Travers, M.-A., Paillard, C., Jean, F. Variability of the hemocyte parameters of Ruditapes philippinarum in the field during an annual cycle. Submitted. Flye Sainte Marie, J. , Kooijman, S.A.L.M., Paillard, C., Jean, F. Effect of brown ring disease on the energy bud- get of the Manila clam Ruditapes philippinarum , a modelling study. In prep. Paillard, C., Ford, S., Powell, E., Flye Sainte Marie, J. , Jean, F., Klinck, J., Hoffman, E. A theoretical individual model of Brown Ring Disease in Manila clams, Ruditapes philippinarum . In prep. Oral communications Flye Sainte Marie, J. , Soudant, P., Lambert, C. Da Silva, M., Paillard, C. and Jean, F.. Impact of Perkinsus sp. infection on haemocyte and physiological parameters of Manila clam Ruditapes philippinarum . Workshop for the Analysis of the Impact of Perkinsosis to the European Shellfish Industry . Vigo, Spain, Spetember 12-14, 2007. Soudant, P., Flye Sainte Marie, J. , Lambert, C., Da Silva, M., Park, K.-I. Jean, F., Paillard, C., Choi. K.-S.. Varia- tions saisonnières des paramètres immunitaires de palourdes japonaise, Ruditapes philippinarum , naturelle- ment infectées par le protozoaire parasite, Perkinsus olseni . Réunion du Réseau Ecologie des Interactions Durables , Brest, France, January 29-31, 2007. Soudant, P., Lambert, C., Flye Sainte Marie, J. , Da Silva, M., Park, K.-I. Jean, F., Paillard, C., Choi. K.-S.. Impact of Perkinsus olseni infection on the physiological and hematological parameters of the clams Ruditapes philippinarum . 9th International Congress on Medical and Applied Malacology (ICMAM) , Qingdao, China, October 17-20 , 2006. Soudant, P., Lambert, C., Flye Sainte Marie, J. , Da Silva, M., Park, K.-I. Jean, F., Paillard, C., Choi. K.-S.. Impact of Perkinsus olseni infection on the physiological and hematological parameters of the clams Ruditapes philippinarum . International Workshop on Summer Mortality of Marine Shellfish , Pusan National University, Busan, Korea, October 11-14, 2006. Flye Sainte Marie, J. , Jean, F., Paillard, C. Mieskin, S., Powell, E., Ford, S. E., Klinck, J., Hoffman, E.. Modé- lisation de la maladie de l’anneau brun chez la palourde Ruditapes philippinarum . Colloque PNEC, "Déve- loppements récents de la recherche en environnement côtier" , Nantes, France, June 26-28, 2006. 2
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