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3D Retinal Organoids: New frontiers for regenerative therapies in the eye Harnessing the potential of stem cells Harnessing the potential of stem cells for the treatment of blinding diseases for the treatment of blinding diseases Natalia


  1. 3D Retinal Organoids: New frontiers for regenerative therapies in the eye Harnessing the potential of stem cells Harnessing the potential of stem cells for the treatment of blinding diseases for the treatment of blinding diseases Natalia Vergara, Ph.D. Assistant Professor, Sue Anschutz-Rodgers Eye Center CellSight Ocular Stem Cell and Regeneration Program Disclosure: no commercial relationships

  2. The human retina • Extension of the central nervous system • 7 main types of neurons and glia organized in 3 cell layers • Lacks regenerative capacity

  3. Retinal degenerations lead to vision loss or blindness Normal retina Retinitis pigmentosa Age Related Macular Degeneration Once the retinal neurons die, there’s no treatment available to recover visual function

  4. So what can we do? The promise of iPS cell technologies Induced Pluripotent Stem Cells http://www.nature.com/news/how-ips-cells-changed-the-world-1.20079

  5. The promise of iPS cell technologies Reprogramming Cellular differentiation in 2 dimensions Directed differentiation iPS cells 3D organoids Therapeutic strategy Donor disease modeling, Brain organoid drug screening, cell therapy Kidney organoid

  6. Can we use these cells to make a retina? Zhong et al., Nature Communications 2014

  7. Can we use these cells to make a retina? These 3D retinal “organoids” recapitulate the histological organization and cellular composition of the native retina How do they accomplish this?

  8. Retinal organoids closely mimic the timing and progression of human retinal development D 20-22 D 25-30 D 30-35 D 35 Human Embryo UNSW Embryology RPE domain ef EF Eye NR domain Development Diencephalon Eye field Establishment of Optic Cup formation Retina lamination Steps specification Retinal Domains hiPSC D 12-20 D 16-25 D 25-35 D 35 In space and time…

  9. Initiation of Cell Differentiation neural fate retinal fate DMEM/F12/N2 DMEM/F12/B27 NEAA/hep NEAA hiPSC neural aggregates retinal lineage Meyer et al, 2009

  10. Recapitulation of the developmental processes leading to the formation of the retina in vivo Eye Field domains Retinal domains In vitro VSX2/MITF VSX2 MITF In vivo VSX2 EF NR / RPE Eye Field Specification Specification Optic Cup

  11. Formation of 3D “ mini retinas ”

  12. Formation of 3D retinal organoids HuCD/PH3/DAPI NR NR apical basal RPE RPE

  13. Cells within organoids follow the spatiotemporal pattern of cell differentiation and lamination of the neural retina W13 Ph A G PAX6/OTX2/DAPI BRN3/DAPI AP2 α /PROX1/DAPI W23 AP2 α /REC/DAPI VSX2/MCM2/DAPI CRALBP/DAPI

  14. Cells within organoids follow the spatiotemporal pattern of cell differentiation and lamination of the neural retina

  15. But are these retinal neurons functional? Photoreceptors in retinal organoids are able to respond to light!

  16. Retinal organoids for clinical applications Reprogramming Directed differentiation iPS cells Cell/ tissue transplantation Donor 3D retinal organoids gene-therapy strategies gene replacement gene correctors / potentiators Disease Therapeutic nanodelivery strategies comparative analysis of delivery efficiency modeling strategy cell-type specific targeting toxicology studies drug screening restoration of protein function cell survival / differentiation / maturation

  17. Challenges and opportunities Reprogramming Directed differentiation iPS cells • Improving differentiation/survival Donor 3D retinal organoids Long production time Death of inner neuronal layers at later stages • Improved disease modeling Disease  6 – 60 years vs. 3D retinal organoids  6 – ? Months Lack of NR/RPE apposition • High throughput capability Substantial variability Lack of quantitative assays for 3-dimensional models Lack of automated technologies

  18. 3-D automated reporter quantification technology (3D-ARQ) Generation of 3-D retinal organoids Automated sorting and Fluorescence scanning platform handling Expression of transgenic fluorescent Drug treatment reporters or fluorescent staining

  19. 3D-ARQ Sensitivity – Reproducibility – Quantitative Power Hoechst EGFP Calcein 10 400 4 S:B ratio S:B ratio S:B ratio 5 200 2 Hoechst: EGFP: Calcein: DNA staining Transgenic Live cell 0 0 0 dye, nuclear protein, labeling dye, cytoplasmic cytoplasmic 1 2 3 4 5 6 7 8 1 2 3 4 5 6 7 8 1 2 3 4 5 6 7 8 YFP DiI BodipyTR 40 1000 10 S:B ratio S:B ratio S:B ratio 20 500 5 DiI: BodipyTR: YFP: Cell Cell Transgenic membrane membrane protein, 0 0 0 labeling dye labeling dye membrane tagged 1 2 3 4 5 6 7 8 1 2 3 4 5 6 7 8 1 2 3 4 5 6 7 8 Fluorescence microplate reader TECAN infinite M1000

  20. 3D-ARQ Quantification of transgene expression levels Assessment of developmental processes Assessment of the physiological status and response to drugs Vergara et al., Development 2017

  21. Prominent features of the 3D-ARQ system: • Facilitates quantitative measurements in complex 3-D retinal organoids • Meets HTS assay quality requirements • Versatility of applications as well as fluorophore selection • Ratiometric strategy accounts for size variability • Ability to perform longitudinal studies • Potential for automation • Possibility to perform drug screening in a human 3-D context that mimics the native histoarchitecture and tissue interactions • Potential applicability to other organoid systems

  22. Retinal organoids for clinical applications Reprogramming Directed differentiation iPS cells Cell/ tissue transplantation Donor 3D retinal organoids gene-therapy strategies gene replacement gene correctors / potentiators Disease Therapeutic nanodelivery strategies comparative analysis of delivery efficiency modeling strategy cell-type specific targeting toxicology studies drug screening restoration of protein function cell survival / differentiation / maturation

  23. CellSight Ocular Stem Cell and Regeneration Research Program Catalyzing Stem Cell innovations to save and restore Sight

  24. CellSight 3D Human Retina Modeling Lab (3DRet Lab) hiPSC technology to model retinal degenerative diseases Dr. Val Canto-Soler Ocular Development and Translational Technologies Laboratory Mechanisms of retina development and regeneration & drug screening Dr. Natalia Vergara Laboratory of Developmental Genetics Genetic pathways regulating retinal cell differentiation Dr. Joseph Brzezinski Laboratory of Advanced Ophthalmic Imaging Non-invasive functional imaging Dr. Omid Masihzadeh

  25. CellSight A multidisciplinary team applying a bench-to-bed-side approach Diagnosis Phenotyping / Genotyping Treatment Patient Registry Sue Anschutz- Rodgers Eye patient-specific iPSC clinical product Center Gates CellSight Biomanufacturing Disease Modeling Facility Gene Therapy Screening Quality Control Drug Screening bench cGMP Manufacturing Cell Therapy Strategy product

  26. Acknowledgements Vergara Lab: Anne Vielle Mike Schwanke Davis Aasen Collaborators: NEI Valeria Canto-Soler Miguel Flores-Bellver Silvia Aparicio-Domingo Kang Liu Christian Gutierrez Joe Brzezinski Omid Masizadeh Xiufeng Zhong Jeff Mumm (Johns Hopkins) David Miguez Gomez (UAM) Gail Seigel (University at Buffalo) Special thanks to Linda Barlow

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