automated tissue type imaging with oct
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Automated tissue type imaging with OCT Ton van Leeuwen DJ Faber, DM - PowerPoint PPT Presentation

Automated tissue type imaging with OCT Ton van Leeuwen DJ Faber, DM de Bruin, NM Weiss, DV Nguyen, SM Jansen, M Almasian, AL Post, L Wilk, MCG Aalders, Berrend Muller, A Swaan (AMC), X Attendu (PolyMtl), J Kalkman (TUD) Academic Medical Center,


  1. Automated tissue type imaging with OCT Ton van Leeuwen DJ Faber, DM de Bruin, NM Weiss, DV Nguyen, SM Jansen, M Almasian, AL Post, L Wilk, MCG Aalders, Berrend Muller, A Swaan (AMC), X Attendu (PolyMtl), J Kalkman (TUD) Academic Medical Center, University of Amsterdam, Biomedical Engineering & Physics: T.G.vanLeeuwen@amc.uva.nl www.amc.nl/BMEP 0/46

  2. Gustav Strijkers Ed van Bavel Henk Marquering Maurice Aalders

  3. • Physics of – Interaction of light with tissue – Development of instrumentation introduction • Application of light dependent scattering – Therapeutic – Diagnostic multiple scattering • Monitoring / function • Imaging / morphology conclusion Optical imaging and sensing of functioning biological systems (cells/organs) Relation between optical properties ( µ a , µ s , g) and status of the tissue or tissue type

  4. OCT is the “Harlem Oil” of Biomedical Optics introduction dependent scattering multiple scattering conclusion See http://www.haarlemmerolie.nl

  5. One drop of OCT solves all the problems… introduction dependent scattering multiple scattering conclusion

  6. What kind of tissue are we looking at? introduction dependent scattering multiple scattering conclusion Velocity (mm/sec)

  7. One drop of OCT solves all the problems… introduction dependent scattering multiple scattering conclusion

  8. Single scattering approximation • OCT signal dependent on: – Depth of focus introduction – Position of the focus dependent – Amount of back scattering scattering – Attenuation coefficient multiple ì ü æ ö scattering 2 zn ( ) ( ) = h g Ä µ - µ ç ÷ i z Re med h ( z ) P P exp 2 z í ý det ref sample b , NA s c è ø î þ conclusion DJ Faber, et al.Optics Express 2004, 12: 4353-4365

  9. • OCT signal dependent on: – Depth of focus introduction – Position of the focus dependent – Amount of back scattering (amplitude of the OCT signal) scattering – Attenuation coefficient multiple ì ü æ ö scattering 2 zn ( ) ( ) = h g Ä µ - µ ç ÷ i z Re med h ( z ) P P exp 2 z í ý det ref sample b , NA s c è ø î þ conclusion 800 nm OCT of rat aorta

  10. • OCT signal dependent on: – Depth of focus introduction – Position of the focus dependent – Amount of back scattering scattering – Attenuation coefficient (‘slope’ of the OCT signal) multiple scattering ì ü æ ö 2 zn ( ) ( ) = h g Ä µ - µ i z Re ç med ÷ h ( z ) P P exp 2 z í ý det ref sample b , NA s è c ø î þ conclusion Kodach et al, Biomedical Optics express 2010, Optics Express 2011

  11. Cardiovascular tissues application of µ t extraction Velocity (mm/sec) Van der Meer et al, IEEE TMI, 2005, 24, 1369-1376 Lasers Med Science 2005, 20, 45-51

  12. • OCT signal dependent on: – Depth of focus introduction – Position of the focus dependent – Amount of back scattering scattering – Attenuation coefficient multiple ì ü æ ö scattering 2 zn ( ) ( ) = h g Ä µ - µ ç ÷ i z Re med h ( z ) P P exp 2 z í ý det ref sample b , NA s c è ø î þ conclusion • Is it so simple to measure ! " (! $%& ≈ ! " )? • How to verify that (e.g. for large ! " )? – ! " ~*+,*-,./0.1+, – ! 2 ~*+,*-,./0.1+, – ! " ~! 2 3 4 – 3 5 = *+,7.0,.

  13. All μ OCT for Intralipid • @ 600, 800, 1300 & 1600 nm (single scattering model) 30 600 nm introduction 800 nm g » 0.8 μ OCT (mm -1 ) 1300 nm 25 1600 nm dependent -1 ) scattering scattering coefficient (mm 20 g » 0.7 multiple scattering 15 conclusion Velocity 10 (mm/sec) g » 0.4 5 g » 0.3 0 0 5 10 15 20 Intralipid concentration (%) Why is the attenuation coefficient saturating for higher concentrations IL?

  14. μ s for high concentrations Dependent scattering for all beads Corrected for dependent scattering with structure factor by Percus-Yevick model introduction 35 ! " ≁ $%&$'&()*(+%& dependent scattering Æ 1215 nm 30 multiple 25 scattering Æ 906 nm 20 conclusion Velocity -1 ) µ s (mm (mm/sec) 15 Æ 759 nm 10 5 Æ 0.376 nm 0 0.00 0.05 0.10 0.15 0.20 0.25 0.30 volume fraction Nguyen et al Optics Express 2013

  15. OCT signal analysis: amplitude ! " ~ $%&$'&()*(+%& introduction Amplitude dependent scattering multiple scattering conclusion Amplitude M Almasian, et al.J BiomOptics, 2015, 20: 121314

  16. OCT signal analysis: amplitude back scattering coefficient/scattering coefficient ' ( ≁ ' * introduction dependent scattering multiple scattering conclusion $ % 2 # ∅ ≈ Mitra Almasian et al, Scientific Reports 2017

  17. Effect of multiple scattering… introduction dependent scattering multiple scattering • Picking up multiple scattered light will reduce µ OCT using conclusion Velocity the single scattering model (mm/sec) • higher scattering values, deeper into the tissue, dependent on g and NA optics • Extended Huygens Fresnel (EHF) model 1 [ ] ( ) ( ) é ù - µ - - µ 2 1 2 exp z 1 exp z W 2 ( ) ( ) [ ( ) ] µ - µ + + - - µ 2 i z exp 2 z s s 1 exp z h ê ú d s s + 2 2 2 W 1 W W W ë û h s h s D. Levitz et al., Optics.Express 2004, 12, 249-259

  18. OCT: dependent (PY) and multiple (EHF)scattering Æ = 0.47 µm Æ = 0.70 µm g Mie+PY = 0.39-0.06 g Mie+PY = 0.71-0.56 introduction dependent scattering multiple scattering conclusion Velocity Æ = 0.91 µm Æ = 1.6 µm (mm/sec) g Mie+PY = 0.79-0.67 g Mie+PY = 0.91-0.87

  19. Spheres, Intralipid, g>0.8, so what? • Blood, µ OCT measured by 800 nm OCT introduction Effect of chosen (fixed) g in EHF model dependent scattering multiple scattering g = 0.995 conclusion Velocity (mm/sec) g = 0.8 Faber et al, OL 2009

  20. Forward scattering of blood • Whole blood flowing through B-scan plane static sample: flow on! phantom Flow channel Solid TiO2 phantom Whole blood flow 400 μm channel, 20 mm/sec Solid TiO2 phantom SM Jansen et al, Sensors 2018

  21. Effect of NA (PSF) on µ OCT • Fitting both µ OCT and g in EHF: no convergence • Setting g correctly results in: introduction ! " 13%& 20%& 51%& dependent scattering % * (&& ,- ) % /01 (&& ,- ) % /01 (&& ,- ) % /01 (&& ,- ) g multiple 5.4 0.91 6 7 10 scattering 14 0.89 22 23 24 conclusion Velocity 21 0.87 40 33 55 (mm/sec) • Better model needed? M Almasian, in progress

  22. But NA (PSF) is more or less constant.. • Fitted PSF (and Roll-of) for 4 C7 Dragonfly tm Intravascular Imaging Probe (St. Jude Medical, introduction St. Paul, Minnesota, USA) dependent scattering multiple scattering conclusion Velocity (mm/sec)

  23. Discussion • It is not as simple as Harlem Oil – " # ≁ %&'%(')*+),&' introduction – " - ~ %&'%(')*+),&' – " # ≁ " - dependent scattering • correctly fitted PSF (and Roll-of) multiple – NA can differ between catheters scattering • If / ≾ 0.8: " 567 ≈ " # conclusion Velocity (mm/sec) – For larger g, more multiple scattered light contributes to the OCT signal • automated tissue type imaging with OCT: – be carefull – other contrast mechanisms – The eye…

  24. What kind of tissue are we looking at? introduction dependent scattering multiple scattering conclusion Velocity (mm/sec)

  25. What kind of tissue are we looking at? introduction dependent scattering multiple scattering conclusion Velocity (mm/sec) OCT during restauration of Rembrandt painting Marten at Rijksmuseum, see https://www.rijksmuseum.nl/nl/marten-en-oopjen

  26. Discussion • It is not as simple as Harlem Oil – " # ≁ %&'%(')*+),&' introduction – " - ~ %&'%(')*+),&' – " # ≁ " - dependent scattering • correctly fitted PSF (and Roll-of) multiple – NA can differ between catheters scattering • If / ≾ 0.8: " 567 ≈ " # conclusion Velocity (mm/sec) – For larger g, more multiple scattered light contributes to the OCT signal • automated tissue type imaging with OCT: – be carefull – other contrast mechanisms – The eye…

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